Virtual Appliance ScipionCloud-GPU | EGI Applications Database

Applications Database
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Applications Database
Supporting
Applications Database
Supporting
Applications Database
Supporting
Applications Database
Supporting

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Name:ScipionCloud-GPU

Description:ScipionCloud-GPU - key CryoEM packages ready to use from your web-browser and GPU enabled

Abstract: Scipion is an image processing framework for obtaining 3D models of macromolecular complexes using Electron Microscopy (3DEM). This appliance provides Scipion to be run on a single node, plus remote desktop installed and configured to access the Virtual Machine through a Web Browser. This appliance is ready to use GPU’s for EM processing and 3D remote visualization. This Virtual Machine has been created using a minimal Ubuntu 16.04 installation with cloud-init contextualization. In order to log into the image a ssh key must be used, default user name is ”ubuntu”. The remote desktop can be accessed at http://VM-IP:8000/vnc.html with the password provided at contextualization. Image was built using packer with the configuration available at https://github.com/I2PC/scipion-cloud/tree/master/scipion-ubuntu-16.04.